123.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: MK431825
Parameters: 2 7 7 80 10 50 500
Length: 415781
Tables: 1
This is table 1 of 1 ( 10 repeats found )
Click on indices to view alignment
Table Explanation
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
45304--45348 23 1.9 24 90 4 74 15 6 44 33 1.73
69192--69234 18 2.4 18 80 0 50 18 20 23 37 1.94
104967--104996 12 2.5 12 94 0 51 53 0 30 16 1.44
208106--208151 22 2.1 22 95 0 83 13 34 19 32 1.90
253041--253080 21 1.9 21 100 0 80 32 25 22 20 1.98
253043--253120 21 3.9 20 76 14 72 28 25 24 21 1.99
260123--260165 18 2.4 18 80 0 50 37 23 20 18 1.94
310569--310647 39 2.0 39 97 0 149 31 18 27 21 1.97
377530--377576 21 2.2 21 88 7 69 19 31 36 12 1.89
386279--386321 18 2.4 18 80 0 50 18 20 23 37 1.94
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!