123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MT665971
    Parameters: 2 7 7 80 10 50 500
    Length:  138032

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  787--824                          19       2.0      19          100       0         76      10   36   26   26   1.89

  13750--13774                      13       1.9      13          100       0         50      40   8    16   36   1.77

  14427--14464                      19       2.0      19          100       0         76      21   31   21   26   1.98

  17283--17328                      22       2.1      22          95        0         83      30   17   36   15   1.91

  30883--30921                      20       2.0      20          85        10        53      35   17   28   17   1.94

  32518--32543                      8        3.2      8           100       0         52      34   0    65   0    0.93

  36933--36963                      2        16.0     2           93        6         55      48   0    0    51   1.00

  46214--46243                      14       2.1      14          100       0         60      36   13   0    50   1.42

  55487--55534                      3        16.0     3           100       0         96      0    33   0    66   0.92

  57612--57654                      2        22.0     2           90        4         70      48   0    2    48   1.14

  66506--66533                      14       2.0      14          100       0         56      21   14   28   35   1.92

  67921--67946                      10       2.6      10          100       0         52      30   30   0    38   1.58

  70018--70055                      19       2.0      19          100       0         76      21   36   15   26   1.93

  123470--123514                    21       2.1      21          91        0         72      33   13   22   31   1.92

  136892--136931                    18       2.2      18          100       0         80      65   0    30   5    1.14
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!