123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MW448462
    Parameters: 2 7 7 80 10 50 500
    Length:  546392

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  1868--1950                        42       2.2      35          72        25        87      32   39   13   14   1.85

  37335--37379                      23       2.0      23          86        0         63      40   0    26   33   1.57

  81082--81124                      18       2.4      18          81        18        54      18   20   25   34   1.96

  85290--85329                      20       2.0      20          85        0         53      40   20   15   25   1.90

  163893--163948                    18       3.1      18          97        0         103     60   5    26   7    1.44

  205962--205990                    14       2.1      14          93        6         51      17   24   31   27   1.97

  206695--206741                    16       2.7      18          87        12        80      27   17   36   19   1.93

  213232--213263                    16       2.0      16          93        0         55      40   15   18   25   1.90

  243702--243741                    20       2.0      20          85        0         53      25   15   20   40   1.90

  247907--247949                    18       2.4      18          81        18        54      34   25   20   18   1.96

  278949--278973                    6        4.2      6           100       0         50      16   36   0    48   1.46

  289565--289610                    16       2.8      17          83        6         58      15   13   19   52   1.75

  295001--295025                    12       2.1      12          100       0         50      32   0    8    60   1.26

  397509--397591                    42       2.2      35          72        25        87      32   39   13   14   1.85

  463018--463048                    15       2.1      15          100       0         62      35   32   0    32   1.58

  523043--523079                    18       2.0      19          89        5         58      16   27   24   32   1.96

  542043--542078                    18       2.0      18          88        0         54      16   19   11   52   1.73
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!