123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MW924383
    Parameters: 2 7 7 80 10 50 500
    Length:  395412

    Tables:   1   

    This is table  1  of  1  ( 18 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  11027--11057                      16       2.0      16          93        6         55      12   22   6    58   1.58

  24545--24587                      18       2.4      18          81        18        54      18   20   25   34   1.96

  41229--41253                      13       1.9      13          100       0         50      40   32   12   16   1.84

  51604--51670                      31       2.2      29          85        15        84      10   29   14   44   1.79

  99803--99851                      24       2.0      24          84        0         62      28   40   14   16   1.87

  101130--101170                    19       2.2      19          90        0         64      29   26   17   26   1.97

  156032--156080                    21       2.3      21          82        0         53      16   24   20   38   1.92

  207114--207155                    19       2.4      18          88        11        61      28   19   23   28   1.98

  215198--215274                    30       2.6      30          74        0         82      23   19   11   45   1.83

  227414--227469                    28       2.0      28          100       0         112     28   14   17   39   1.89

  254392--254441                    21       2.4      21          96        0         91      12   26   18   44   1.84

  254392--254449                    21       2.8      21          89        5         73      15   22   20   41   1.90

  285487--285554                    21       3.2      21          82        0         82      11   22   7    58   1.57

  314968--315046                    39       2.0      39          97        0         149     31   18   27   21   1.97

  327048--327091                    23       1.9      23          86        9         63      72   4    20   2    1.13

  332935--332973                    18       2.2      18          100       0         78      33   5    25   35   1.78

  359129--359200                    24       3.0      24          100       0         144     50   8    25   16   1.73

  388001--388034                    15       2.3      15          89        0         50      11   47   2    38   1.55
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!