123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_016742
    Parameters: 2 7 7 80 10 50 500
    Length:  425718

    Tables:   1   

    This is table  1  of  1  ( 7 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  8735--8764                        15       2.0      15          93        0         51      30   0    33   36   1.58

  41334--41358                      13       1.9      13          100       0         50      32   8    0    60   1.26

  213713--213755                    18       2.4      18          81        18        54      34   25   20   18   1.96

  219612--219667                    22       2.5      22          79        0         58      46   1    16   35   1.57

  248456--248482                    5        5.4      5           100       0         54      40   0    0    59   0.98

  280819--280849                    15       2.1      15          93        0         53      48   6    3    41   1.45

  367283--367307                    12       2.1      12          100       0         50      32   0    8    60   1.26
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!