123.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_038053
Parameters: 2 7 7 80 10 50 500
Length: 566589
Tables: 1
This is table 1 of 1 ( 14 repeats found )
Click on indices to view alignment
Table Explanation
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
128315--128363 24 2.0 24 84 0 62 28 40 14 16 1.87
131162--131204 18 2.4 18 81 18 54 18 20 25 34 1.96
246465--246507 21 2.0 22 86 4 61 9 41 18 30 1.82
260111--260156 16 2.8 17 83 6 58 52 19 15 13 1.75
290005--290044 21 1.9 21 85 10 55 42 30 5 22 1.75
386634--386661 7 4.0 7 100 0 56 28 28 0 42 1.56
443582--443628 20 2.5 19 83 13 53 31 17 4 46 1.67
450630--450676 25 1.9 24 87 12 69 6 42 14 36 1.72
455435--455510 29 2.7 29 91 2 100 26 19 32 21 1.97
455447--455510 29 2.2 29 100 0 128 23 23 32 20 1.98
455447--455523 29 2.7 29 91 0 100 24 19 36 19 1.95
463128--463171 23 1.9 22 82 17 54 18 22 22 36 1.95
504469--504496 7 4.0 7 100 0 56 28 28 0 42 1.56
565846--565888 18 2.4 18 81 18 54 34 25 20 18 1.96
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!