123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_048499
    Parameters: 2 7 7 80 10 50 500
    Length:  301823

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  18170--18203                      17       2.0      17          100       0         68      29   17   11   41   1.85

  18776--18812                      14       2.4      16          82        8         51      13   37   21   27   1.91

  54616--54648                      5        6.6      5           100       0         66      21   18   0    60   1.36

  133731--133779                    15       3.3      15          78        16        66      46   10   22   20   1.80

  133722--133779                    29       2.0      29          100       0         116     44   13   24   17   1.85

  133722--133765                    14       3.1      14          75        18        54      45   15   22   15   1.85

  133729--133775                    14       3.3      14          77        16        60      42   12   25   19   1.86

  166267--166308                    21       2.0      21          100       0         84      38   9    23   28   1.86

  171904--171939                    18       1.9      19          88        5         56      30   27   27   13   1.94

  177708--177747                    19       2.1      19          100       0         80      50   10   15   25   1.74

  258107--258178                    30       2.4      30          95        0         126     19   34   36   9    1.85

  298961--298995                    3        11.7     3           100       0         70      34   0    31   34   1.58
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!