123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_065236
    Parameters: 2 7 7 80 10 50 500
    Length:  277763

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  795--824                          15       2.0      15          100       0         60      46   20   13   20   1.83

  13141--13198                      22       2.6      22          86        0         80      44   10   29   15   1.79

  25801--25840                      20       2.0      20          100       0         80      25   10   10   55   1.64

  41237--41280                      22       2.0      22          100       0         88      18   18   18   45   1.86

  54008--54133                      60       2.1      60          83        0         153     19   23   26   30   1.98

  108707--108756                    25       2.0      25          100       0         100     20   8    36   36   1.82

  153080--153136                    28       2.0      28          96        0         105     10   28   22   38   1.87

  153157--153200                    22       2.0      22          95        0         79      22   25   15   36   1.94

  170943--170985                    18       2.4      18          81        18        54      18   20   25   34   1.96

  196708--196733                    13       2.0      13          100       0         52      38   23   7    30   1.83

  197688--197717                    15       2.0      15          93        0         51      20   43   10   26   1.83

  205798--205833                    18       1.9      19          88        5         56      30   27   27   13   1.94

  210399--210477                    39       2.0      39          95        0         140     32   18   26   21   1.97

  221589--221662                    22       3.4      22          96        0         130     41   10   32   14   1.81

  221584--221682                    44       2.3      43          81        8         119     41   12   34   12   1.79
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!