123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_066894
    Parameters: 2 7 7 80 10 50 500
    Length:  543794

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  29605--29643                      20       2.0      20          100       0         78      35   10   5    48   1.59

  29846--29882                      15       2.5      15          100       0         74      5    35   5    54   1.47

  43460--43505                      5        9.2      5           100       0         92      21   19   0    58   1.39

  57922--57956                      9        4.0      9           88        3         54      34   14   31   20   1.92

  201161--201196                    18       2.0      18          88        0         54      33   27   27   11   1.91

  280503--280538                    17       2.1      17          89        0         54      61   5    30   2    1.33

  299475--299523                    24       2.0      24          84        0         62      16   14   40   28   1.87

  445389--445446                    29       2.0      29          100       0         116     34   17   27   20   1.95

  467317--467343                    13       2.1      13          100       0         54      70   7    0    22   1.12

  468462--468486                    12       2.1      12          100       0         50      48   8    0    44   1.32

  488048--488081                    17       2.0      17          94        0         59      5    29   2    61   1.34

  526419--526447                    14       2.1      14          100       0         58      44   0    20   34   1.52
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!