123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_071229
    Parameters: 2 7 7 80 10 50 500
    Length:  404807

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  36479--36534                      29       1.9      29          85        7         78      25   23   21   30   1.99

  69874--69899                      13       2.0      13          100       0         52      30   15   23   30   1.95

  136808--136840                    14       2.4      14          90        5         50      27   15   0    57   1.38

  165910--165950                    15       2.7      15          84        0         64      31   29   19   19   1.96

  233699--233736                    18       2.1      18          90        0         58      60   5    7    26   1.46

  233693--233739                    23       2.0      23          84        8         60      59   6    8    25   1.50

  304836--304877                    21       2.0      22          90        4         68      11   47   14   26   1.78

  310642--310684                    18       2.4      18          81        18        54      18   20   25   34   1.96

  331496--331521                    13       2.0      13          100       0         52      30   15   23   30   1.95

  372618--372642                    12       2.1      12          100       0         50      8    16   0    76   1.02

  377800--377825                    5        5.2      5           100       0         52      38   19   19   23   1.93

  395312--395353                    20       2.2      19          83        12        50      30   19   2    47   1.62
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!