123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_081498
    Parameters: 2 7 7 80 10 50 500
    Length:  351043

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  85581--85612                      9        3.6      9           95        0         55      15   21   9    53   1.70

  105311--105509                    70       2.8      69          78        7         224     33   24   13   28   1.93

  159747--159792                    23       2.0      23          95        0         83      28   13   8    50   1.70

  166798--166835                    19       2.0      20          85        15        53      39   10   7    42   1.69

  199613--199686                    20       3.7      20          100       0         148     14   35   17   32   1.91

  208011--208048                    15       2.4      16          87        12        53      23   13   13   50   1.76

  221916--221963                    24       1.9      26          83        8         64      58   12   6    22   1.57

  270247--270325                    39       2.0      39          95        0         140     32   18   26   21   1.97

  286533--286591                    29       2.0      29          100       0         118     33   10   32   23   1.88

  286527--286597                    29       2.8      24          79        20        90      35   11   28   25   1.90

  341352--341391                    20       2.0      20          100       0         80      25   10   30   35   1.88

  344874--344907                    16       2.1      16          88        0         50      23   11   35   29   1.90
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!