123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: OR333986
    Parameters: 2 7 7 80 10 50 500
    Length:  605764

    Tables:   1   

    This is table  1  of  1  ( 8 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  126250--126285                    2        18.5     2           88        5         56      47   0    0    52   1.00

  126250--126282                    17       1.9      17          93        0         57      45   0    0    54   0.99

  214343--214388                    24       1.9      24          86        8         67      26   30   17   26   1.97

  214343--214378                    18       2.0      18          88        0         54      30   27   16   25   1.97

  215730--215763                    12       2.8      12          90        0         50      41   0    14   44   1.45

  310562--310603                    22       1.9      22          90        0         66      21   28   33   16   1.95

  439062--439100                    19       2.1      18          90        4         60      58   5    0    35   1.20

  458199--458236                    20       1.9      20          84        10        51      21   10   10   57   1.61
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!