MN885667.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MN885667.1 Pyrrosia petiolosa chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  163026

    Tables:   1   

    This is table  1  of  1  ( 14 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  8560--8588                         15       1.9      15          100       0         58      34   13   6    44   1.71

  27273--27321                       8        6.4      8           83        9         66      51   10   0    38   1.36

  27273--27320                       22       2.2      22          88        0         69      52   10   0    37   1.36

  27278--27321                       10       4.4      10          84        15        56      52   9    0    38   1.33

  39821--39846                       13       2.0      13          100       0         52      30   15   0    53   1.42

  58889--58926                       19       2.0      19          94        0         67      13   23   5    57   1.56

  58968--58998                       9        3.4      9           90        0         53      22   22   32   22   1.98

  59637--59666                       9        3.3      9           100       0         60      26   10   30   33   1.89

  61048--61144                       9        10.8     9           74        4         70      31   28   16   22   1.96

  64189--64238                       15       3.3      15          85        0         64      24   16   32   28   1.96

  108868--108917                     24       2.1      24          88        0         73      44   14   16   26   1.85

  113812--113847                     18       2.0      18          88        0         54      27   16   38   16   1.90

  136535--136570                     18       2.0      18          88        0         54      16   38   16   27   1.90

  141465--141514                     24       2.1      24          88        0         73      26   16   14   44   1.85
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!