MT899992.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: MT899992.1 UNVERIFIED: Arnica montana chloroplast sequence
Parameters: 2 7 7 80 10 50 500
Length: 133785
Tables: 1
This is table 1 of 1 ( 23 repeats found )
Click on indices to view alignment
Table Explanation
---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
1528--1555 14 2.0 14 100 0 56 35 14 7 42 1.73
2756--2905 74 2.0 74 98 0 291 28 20 26 25 1.99
6647--6688 18 2.3 18 95 4 75 33 4 7 54 1.49
6701--6730 15 2.0 15 93 0 51 36 16 13 33 1.88
13564--13623 15 4.0 15 97 0 111 55 6 11 26 1.60
13818--13855 20 1.9 20 89 10 60 47 5 7 39 1.55
13840--13867 12 2.3 12 100 0 56 57 0 7 35 1.26
17977--18023 21 2.2 21 96 0 85 34 14 6 44 1.71
22615--22655 21 2.0 21 90 0 64 31 21 12 34 1.91
24465--24507 12 3.6 12 77 0 50 67 2 4 25 1.22
24460--24507 24 2.0 24 100 0 96 62 4 4 29 1.32
24463--24518 24 2.5 24 88 8 82 60 5 7 26 1.44
45926--45994 9 7.7 9 70 0 57 28 11 26 33 1.91
45932--45994 18 3.5 18 100 0 126 28 11 26 33 1.91
81325--81387 18 3.5 18 100 0 126 33 26 11 28 1.91
81325--81393 9 7.7 9 70 0 57 33 26 11 28 1.91
95818--95857 19 2.1 19 100 0 80 45 10 20 25 1.81
113982--114006 12 2.1 12 100 0 50 60 8 8 24 1.52
118848--118889 22 2.0 22 86 13 61 54 2 14 28 1.52
119060--119104 23 2.0 23 91 4 74 51 22 6 20 1.70
120014--120048 17 2.1 16 94 5 61 37 17 8 37 1.80
123516--123541 13 2.0 13 100 0 52 38 7 23 30 1.83
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
130779--130804 13 2.0 13 100 0 52 61 15 0 23 1.33
---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!