NC_020320.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_020320.1 Chrysanthemum indicum voucher HeN001 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  150972

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  5017--5049                         15       2.3      15          94        5         59      54   9    12   24   1.66

  8754--8795                         21       2.0      21          100       0         84      33   14   9    42   1.78

  25043--25067                       12       2.1      12          100       0         50      60   8    8    24   1.52

  30097--30139                       21       2.0      22          90        4         70      48   25   6    18   1.73

  45845--45878                       17       2.0      17          100       0         68      70   0    17   11   1.16

  47673--47707                       15       2.4      14          90        9         52      60   20   0    20   1.37

  51740--51774                       15       2.3      15          90        0         52      34   14   14   37   1.86

  56212--56261                       24       2.1      24          100       0         100     36   16   16   32   1.90

  65258--65293                       17       2.1      17          100       0         72      58   5    19   16   1.58

  66694--66734                       21       2.0      21          95        0         73      31   24   9    34   1.88

  76374--76401                       14       2.0      14          100       0         56      42   7    7    42   1.59

  89951--90025                       18       4.4      17          88        8         73      29   8    25   37   1.84

  89962--90025                       9        7.1      9           74        0         65      29   7    26   35   1.85

  89961--90038                       18       4.3      18          96        0         138     29   10   25   34   1.89

  97616--97640                       10       2.5      10          100       0         50      40   8    0    52   1.31

  105627--105688                     32       1.9      32          96        0         115     41   20   8    29   1.81

  128008--128069                     32       1.9      32          96        0         115     29   8    20   41   1.81

  136056--136080                     10       2.5      10          100       0         50      52   0    8    40   1.31

  143658--143735                     18       4.3      18          96        0         138     34   25   10   29   1.89

  143658--143735                     9        8.7      9           71        0         66      34   25   10   29   1.89

  143707--143745                     18       2.4      16          87        12        53      41   23   5    30   1.76
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!