NC_021111.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_021111.1 Cistanche deserticola chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  102657

    Tables:   1   

    This is table  1  of  1  ( 13 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  5885--5914                         15       2.0      15          100       0         60      26   6    13   53   1.64

  7065--7135                         27       2.8      24          78        12        79      26   0    28   45   1.54

  7065--7160                         27       3.8      24          81        12        77      29   0    29   41   1.56

  7093--7159                         9        7.4      9           93        0         107     31   0    31   37   1.58

  46369--46435                       9        7.4      9           93        0         107     37   31   0    31   1.58

  46369--46460                       27       3.5      27          85        4         118     40   30   0    29   1.57

  47614--47643                       15       2.0      15          100       0         60      53   13   6    26   1.64

  64740--64773                       17       2.0      17          100       0         68      29   11   23   35   1.90

  68238--68437                       9        23.6     9           79        13        201     0    53   0    46   1.00

  68248--68437                       15       12.9     15          85        10        252     0    53   0    46   1.00

  68239--68437                       30       6.7      30          87        11        304     0    53   0    46   1.00

  73267--73294                       13       2.2      13          100       0         56      32   21   0    46   1.52

  74055--74079                       12       2.1      12          100       0         50      60   8    8    24   1.52
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!