NC_022136.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_022136.1 Lygodium japonicum chloroplast, complete genome
Parameters: 2 7 7 80 10 50 500
Length: 157260
Tables: 1
This is table 1 of 1 ( 10 repeats found )
Click on indices to view alignment
Table Explanation
---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
14543--14577 17 2.1 17 88 0 52 51 14 25 8 1.70
29808--29843 18 2.0 18 100 0 72 61 5 16 16 1.53
45825--45903 38 2.1 38 100 0 158 32 22 12 31 1.92
88406--88619 54 4.0 54 100 0 428 26 20 18 35 1.95
89046--89082 19 1.9 19 88 0 56 56 0 43 0 0.99
117691--117751 15 4.0 15 91 2 95 27 22 6 42 1.78
119463--119500 20 1.9 20 88 0 58 31 13 18 36 1.89
126495--126530 13 2.8 13 95 0 63 11 22 2 63 1.39
153627--153663 19 1.9 19 88 0 56 0 43 0 56 0.99
154090--154303 54 4.0 54 100 0 428 35 18 20 26 1.95
---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!