NC_022451.2.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_022451.2 Andrographis paniculata chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  150249

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  6146--6177                         16       2.0      16          93        0         55      40   12   15   31   1.85

  41110--41156                       16       2.9      16          84        6         51      23   8    10   57   1.60

  44972--45028                       23       2.5      24          81        18        68      38   5    5    50   1.47

  45582--45610                       14       2.1      14          100       0         58      34   13   13   37   1.85

  49520--49573                       2        27.5     2           78        10        58      40   0    3    55   1.17

  49520--49576                       15       3.8      15          88        4         80      40   0    3    56   1.17

  49517--49571                       27       2.0      27          89        7         83      40   0    3    56   1.17

  57706--57742                       16       2.2      17          95        4         67      45   18   13   21   1.84

  58668--58711                       21       2.1      21          95        0         79      31   20   13   34   1.92

  66333--66362                       14       2.1      14          93        0         51      33   10   13   43   1.77

  66918--66942                       13       1.9      13          100       0         50      88   4    8    0    0.64

  73929--73963                       17       2.1      17          100       0         70      22   17   5    54   1.64

  73926--73966                       17       2.6      15          85        14        64      26   19   4    48   1.69

  87133--87187                       24       2.5      22          85        8         67      14   23   12   49   1.78

  87155--87222                       21       3.2      21          77        8         75      11   22   8    57   1.61

  105173--105264                     31       3.0      31          96        0         166     40   22   9    27   1.85

  121331--121360                     14       2.1      15          93        6         53      13   20   13   53   1.72

  123963--123996                     15       2.3      15          94        0         59      23   11   26   38   1.89

  124401--124427                     13       2.1      13          100       0         54      40   0    0    59   0.98

  127445--127536                     31       3.0      31          96        0         166     27   9    22   40   1.85

  145487--145576                     21       4.1      22          75        8         76      54   10   23   12   1.67
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!