NC_023240.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_023240.1 Magnolia salicifolia chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  160093

    Tables:   1   

    This is table  1  of  1  ( 20 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  6426--6456                         15       2.1      15          100       0         62      41   19   12   25   1.87

  14111--14154                       20       2.2      20          84        8         54      18   4    4    72   1.19

  14111--14154                       21       2.2      20          87        4         61      18   4    4    72   1.19

  45056--45097                       21       2.0      21          100       0         84      57   0    19   23   1.41

  50774--50813                       20       2.0      20          100       0         80      40   20   15   25   1.90

  62755--62790                       15       2.3      16          90        4         56      50   8    2    38   1.47

  62790--62825                       17       2.1      17          94        0         63      50   13   5    30   1.65

  71972--72015                       21       2.1      21          91        8         72      29   25   13   31   1.94

  73114--73162                       15       3.3      15          74        20        50      57   0    16   26   1.40

  83280--83328                       24       2.0      24          92        0         80      28   36   12   22   1.90

  87303--87347                       21       2.1      21          91        0         72      0    28   2    68   1.01

  90612--90642                       15       2.1      15          100       0         62      19   32   0    48   1.49

  92875--92963                       21       4.1      21          91        5         126     13   24   10   51   1.71

  95329--95385                       24       2.4      24          100       0         114     33   8    24   33   1.86

  113290--113355                     18       3.4      18          70        25        62      36   12   21   30   1.90

  132790--132864                     18       4.2      18          100       0         150     22   10   16   50   1.75

  134882--134947                     18       3.4      18          70        25        62      30   21   12   36   1.90

  152852--152908                     24       2.4      24          100       0         114     33   24   8    33   1.86

  155274--155362                     21       4.1      21          91        5         126     51   10   24   13   1.71

  157595--157625                     15       2.1      15          100       0         62      48   0    32   19   1.49
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!