NC_029391.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_029391.1 Angelica acutiloba voucher 13F-28 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  147074

    Tables:   1   

    This is table  1  of  1  ( 20 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  8857--8886                         15       2.0      15          100       0         60      20   13   6    60   1.55

  21438--21534                       49       2.0      49          89        0         149     29   17   20   31   1.96

  29287--29335                       15       3.2      15          83        11        55      51   12   0    36   1.40

  29286--29330                       22       2.0      22          100       0         90      48   13   0    37   1.42

  32539--32564                       13       2.0      13          100       0         52      46   7    23   23   1.78

  33986--34012                       13       2.1      13          100       0         54      40   7    22   29   1.81

  48132--48164                       11       3.0      11          90        0         57      39   6    0    54   1.25

  48137--48177                       13       3.3      13          86        6         50      43   4    2    48   1.37

  53652--53695                       22       2.0      22          100       0         88      40   9    18   31   1.81

  63242--63268                       14       1.9      14          100       0         54      40   14   7    37   1.74

  69185--69225                       21       2.0      21          90        0         64      26   26   12   34   1.92

  75485--75521                       19       1.9      19          94        0         65      54   13   8    24   1.66

  89617--89684                       21       3.2      21          77        8         75      11   22   8    57   1.61

  90793--90844                       15       3.5      15          97        0         95      26   34   17   21   1.95

  92064--92129                       18       3.7      18          97        0         114     28   7    27   36   1.84

  92064--92128                       9        7.2      9           73        0         58      29   7    27   35   1.85

  107852--107917                     32       2.1      32          97        0         123     40   24   9    25   1.84

  111440--111495                     20       3.0      20          89        7         82      57   5    7    30   1.48

  119308--119337                     12       2.5      12          94        0         51      46   0    6    46   1.29

  132525--132590                     32       2.1      32          97        0         123     25   9    24   40   1.84
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!