NC_034688.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_034688.1 Digitalis lanata plastid, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  153108

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  6193--6231                         19       2.1      19          100       0         78      17   20   0    61   1.34

  13737--13776                       20       2.0      20          100       0         80      20   25   10   45   1.81

  40015--40043                       15       1.9      15          100       0         58      17   34   34   13   1.89

  50587--50611                       11       2.3      11          100       0         50      16   36   8    40   1.77

  54897--54921                       11       2.3      11          100       0         50      28   8    0    64   1.22

  63744--63788                       22       2.0      22          100       0         90      42   13   4    40   1.64

  68107--68146                       21       1.9      21          94        0         71      30   27   12   30   1.93

  75024--75064                       21       1.9      22          85        5         57      48   4    12   34   1.62

  88679--88733                       24       2.5      22          85        8         67      14   23   12   49   1.78

  88701--88768                       21       3.2      21          77        8         75      11   22   8    57   1.61

  91103--91192                       18       5.2      18          86        4         114     32   7    26   33   1.85

  98796--98833                       18       2.1      18          90        0         58      26   5    10   57   1.53

  106752--106812                     31       2.0      31          96        0         113     39   22   9    27   1.86

  107636--107676                     20       2.0      20          100       0         82      53   9    9    26   1.65

  111303--111341                     20       2.0      20          85        10        53      56   23   0    20   1.42

  129369--129409                     20       2.0      20          100       0         82      26   9    9    53   1.65

  130233--130293                     31       2.0      31          96        0         113     27   9    22   39   1.86

  138185--138219                     17       2.0      17          88        5         52      45   25   0    28   1.54

  138212--138249                     18       2.1      18          90        0         58      57   10   5    26   1.53

  145853--145926                     18       4.1      18          91        0         112     32   27   8    32   1.86

  148277--148366                     21       4.1      22          75        8         76      54   10   23   12   1.67
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!