NC_035236.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_035236.1 Cinnamomum verum chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152766

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  3902--3926                         12       2.1      12          100       0         50      60   8    16   16   1.58

  31955--31994                       20       2.0      20          85        9         55      52   7    0    40   1.30

  31961--31990                       15       2.0      15          100       0         60      53   6    0    40   1.27

  33552--33590                       15       2.5      15          87        4         51      41   12   7    38   1.72

  34946--34978                       17       1.9      17          93        0         57      57   0    30   12   1.35

  48547--48578                       13       2.4      13          94        5         55      59   12   18   9    1.59

  71632--71676                       21       2.1      21          87        0         63      33   26   11   28   1.91

  91869--92006                       36       3.8      36          96        0         240     16   10   8    64   1.48

  92243--92293                       21       2.4      20          90        9         75      45   21   15   17   1.86

  92583--92671                       21       4.1      21          85        5         108     13   26   10   49   1.74

  94241--94284                       21       2.1      21          83        8         54      31   15   25   27   1.96

  95034--95090                       24       2.4      24          100       0         114     33   8    24   33   1.86

  112186--112225                     19       2.1      19          100       0         80      32   35   0    32   1.58

  125645--125678                     9        3.4      10          88        12        52      55   29   0    14   1.40

  129380--129424                     18       2.5      18          85        0         63      17   8    6    66   1.40

  132467--132520                     18       3.0      18          100       0         108     22   27   11   38   1.88

  132619--132708                     18       5.0      18          95        0         162     11   14   11   63   1.52

  134247--134286                     19       2.1      19          100       0         80      32   0    35   32   1.58

  151382--151438                     24       2.4      24          100       0         114     33   24   8    33   1.86
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!