NC_035882.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_035882.1 Cinnamomum camphora chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152570

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  ----------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                             Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                      Size     Number   Size        Matches   Indels                                (0-2)

  3909--3933                          12       2.1      12          100       0         50      60   8    16   16   1.58

  33549--33587                        15       2.5      15          87        4         51      41   12   7    38   1.72

  34943--34975                        17       1.9      17          93        0         57      57   0    30   12   1.35

  48542--48573                        13       2.4      13          94        5         55      59   12   18   9    1.59

  71637--71681                        21       2.1      21          87        0         63      33   26   11   28   1.91

  91862--91999                        36       3.8      36          96        0         240     16   10   8    64   1.48

  92236--92286                        21       2.4      20          90        9         75      45   21   15   17   1.86

  92576--92664                        21       4.1      21          85        5         108     13   26   10   49   1.74

  94234--94277                        21       2.1      21          83        8         54      31   15   25   27   1.96

  95027--95083                        24       2.4      24          100       0         114     33   8    24   33   1.86

  112192--112231                      19       2.1      19          100       0         80      32   35   0    32   1.58

  113770--113859                      18       5.0      18          94        0         153     62   11   15   11   1.55

  113958--113993                      18       2.0      18          100       0         72      38   11   27   22   1.88

  117041--117081                      18       2.2      19          91        4         66      65   9    7    17   1.44

  132679--133078                      200      2.0      200         100       0         800     24   19   16   40   1.90

  134433--134472                      19       2.1      19          100       0         80      32   0    35   32   1.58

  151209--151265                      24       2.4      24          100       0         114     33   24   8    33   1.86
  ----------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!