NC_037217.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_037217.1 Fritillaria verticillata isolate CBX32-1 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151959

    Tables:   1   

    This is table  1  of  1  ( 20 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  27752--27791                       13       3.1      13          89        10        64      52   0    0    47   1.00

  30114--30160                       13       3.6      13          94        0         67      53   8    2    36   1.44

  30106--30145                       22       1.9      20          90        10        62      52   12   0    35   1.39

  44178--44240                       27       2.4      27          82        10        69      50   4    0    44   1.23

  44206--44246                       17       2.4      17          77        22        50      51   2    0    46   1.14

  44490--44529                       20       2.0      20          100       0         80      40   15   20   25   1.90

  45850--45875                       13       2.0      13          100       0         52      46   15   0    38   1.46

  54126--54158                       15       2.1      16          88        5         50      24   0    3    72   0.98

  56381--56441                       24       2.4      24          75        8         59      42   6    1    49   1.38

  75322--75356                       15       2.4      15          95        4         63      45   5    0    48   1.26

  76808--76856                       24       2.0      24          88        0         71      26   32   14   26   1.94

  77291--77334                       21       2.1      21          100       0         88      22   13   4    59   1.53

  79273--79309                       18       2.1      18          90        10        58      21   0    10   67   1.21

  86566--86613                       21       2.3      21          96        0         87      12   33   8    45   1.72

  88906--88986                       24       3.4      24          94        0         144     32   8    23   35   1.85

  110504--110554                     22       2.3      23          79        3         59      33   3    3    58   1.35

  122825--122854                     15       2.0      15          93        0         51      43   10   0    46   1.37

  144704--144784                     24       3.4      24          94        0         144     35   23   8    32   1.85

  147077--147124                     21       2.2      22          92        7         89      45   8    33   12   1.72

  147084--147138                     21       2.5      21          88        8         74      43   10   29   16   1.82
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!