NC_037705.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_037705.1 Fagopyrum dibotrys chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  159320

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  7796--7839                         19       2.4      18          81        7         54      56   6    2    34   1.38

  45423--45466                       22       2.0      22          100       0         88      40   4    4    50   1.43

  46405--46438                       18       1.9      17          88        5         50      38   17   20   23   1.93

  66569--66602                       15       2.2      16          89        5         52      50   5    5    38   1.51

  71627--71656                       15       2.0      15          100       0         60      53   6    13   26   1.64

  86716--86745                       15       2.0      15          93        0         51      20   10   13   56   1.65

  86872--86899                       14       2.0      14          100       0         56      28   7    7    57   1.52

  98740--98787                       23       2.1      23          100       0         96      39   31   12   16   1.86

  107516--107581                     32       2.1      32          91        0         105     40   24   7    27   1.82

  109932--109984                     21       2.5      22          85        11        76      30   13   20   35   1.91

  110586--110635                     24       2.1      24          88        0         73      34   14   18   34   1.90

  110773--110856                     21       4.0      21          96        0         159     52   13   19   15   1.75

  113987--114063                     24       3.2      24          98        0         145     64   12   12   9    1.48

  117806--117833                     13       2.2      13          100       0         56      57   0    7    35   1.26

  129680--129756                     24       3.2      24          98        0         145     9    12   12   64   1.48

  132887--132970                     21       4.0      21          96        0         159     15   19   13   52   1.75

  133108--133157                     24       2.1      24          88        0         73      34   18   14   34   1.90

  133759--133811                     21       2.5      21          87        0         79      35   20   13   30   1.91

  144956--145003                     23       2.1      23          100       0         96      16   12   31   39   1.86

  156844--156871                     14       2.0      14          100       0         56      57   7    7    28   1.52

  156998--157027                     15       2.0      15          93        0         51      56   13   10   20   1.65
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!