NC_037879.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_037879.1 Paeonia suffruticosa chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  153119

    Tables:   1   

    This is table  1  of  1  ( 20 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  4457--4507                         18       2.8      18          84        0         66      62   0    3    33   1.13

  4476--4511                         18       2.1      17          90        10        56      61   0    0    38   0.96

  14510--14535                       13       2.0      13          100       0         52      30   30   15   23   1.95

  16667--16692                       12       2.2      12          100       0         52      30   7    15   46   1.74

  37438--37498                       30       2.0      30          100       0         122     22   27   13   36   1.92

  49320--49364                       19       2.4      18          82        17        56      17   11   2    68   1.29

  50003--50032                       15       2.0      15          100       0         60      46   13   6    33   1.69

  55626--55657                       16       2.0      16          100       0         64      31   12   12   43   1.80

  64305--64359                       29       1.9      30          92        7         96      50   7    1    40   1.40

  64304--64374                       29       2.4      30          83        7         90      47   5    2    43   1.41

  91366--91447                       18       4.6      18          93        0         137     25   17   28   29   1.97

  99024--99052                       13       2.3      13          94        5         51      20   3    0    75   0.94

  106548--106637                     46       2.0      46          97        0         171     22   17   38   21   1.93

  108768--108865                     49       2.0      49          97        0         187     31   22   19   26   1.98

  125621--125681                     33       1.9      32          83        9         81      27   4    11   55   1.56

  128825--128922                     49       2.0      49          97        0         187     26   19   22   31   1.98

  131053--131142                     46       2.0      46          97        0         171     21   38   17   22   1.93

  138638--138666                     13       2.3      13          94        5         51      75   0    3    20   0.94

  138637--138668                     12       2.4      14          85        15        50      75   0    3    21   0.95

  146243--146324                     18       4.6      18          93        0         137     29   28   17   25   1.97
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!