NC_040943.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_040943.1 Tamarix chinensis voucher 14CS9210 (KUN) plastid, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  156178

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  94--127                            17       2.0      17          100       0         68      35   0    5    58   1.22

  7858--7884                         13       2.1      13          100       0         54      25   14   7    51   1.68

  15186--15227                       12       3.5      12          75        12        50      52   2    14   30   1.54

  15179--15232                       24       2.2      24          96        0         99      48   3    11   37   1.57

  53659--53700                       17       2.5      17          100       0         84      9    0    14   76   1.02

  55974--56002                       12       2.5      12          94        5         51      13   10   10   65   1.47

  60142--60174                       9        3.7      9           88        12        50      45   0    9    45   1.35

  68230--68270                       21       2.0      21          85        9         57      46   2    2    48   1.28

  68674--68714                       21       2.0      21          85        0         55      31   26   9    31   1.89

  89776--89823                       21       2.3      21          82        10        55      10   22   8    58   1.58

  92177--92242                       9        7.3      9           80        0         78      31   4    25   37   1.76

  92180--92245                       27       2.4      27          87        0         96      31   6    27   34   1.81

  110097--110228                     65       2.0      65          97        0         246     30   12   20   36   1.90

  111364--111403                     12       3.2      12          86        6         53      77   2    0    20   0.88

  111355--111399                     16       2.7      17          82        6         56      75   2    2    20   1.01

  121857--121882                     13       2.0      13          100       0         52      46   0    23   30   1.53

  130709--130840                     65       2.0      65          97        0         246     36   20   12   30   1.90

  148695--148760                     9        7.3      9           80        0         78      37   25   4    31   1.76

  148695--148757                     27       2.3      27          88        0         90      36   26   4    31   1.78
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!