NC_045255.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_045255.1 Lindera communis voucher PDBK TC2016-0705 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152668

    Tables:   1   

    This is table  1  of  1  ( 16 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  3909--3933                         12       2.1      12          100       0         50      60   8    16   16   1.58

  31977--32016                       20       2.0      20          85        9         55      52   7    0    40   1.30

  31983--32012                       15       2.0      15          100       0         60      53   6    0    40   1.27

  33570--33608                       15       2.5      15          91        4         60      43   12   5    38   1.65

  34972--35004                       17       1.9      17          93        0         57      57   0    30   12   1.35

  48561--48592                       13       2.4      13          94        5         55      59   12   18   9    1.59

  50690--50743                       18       3.0      18          100       0         108     11   50   0    38   1.38

  71659--71703                       21       2.1      21          87        0         63      33   26   11   28   1.91

  92558--92646                       21       4.1      21          81        5         90      13   24   10   51   1.71

  94216--94259                       21       2.1      21          83        8         54      31   15   25   27   1.96

  95009--95065                       24       2.4      24          100       0         114     33   8    24   33   1.86

  102067--102117                     25       2.1      23          89        7         75      15   3    3    76   1.08

  129380--129420                     18       2.2      19          86        4         57      17   9    9    63   1.51

  132584--132637                     18       3.0      18          94        0         90      11   16   11   61   1.57

  144232--144282                     23       2.1      23          89        7         75      76   3    3    15   1.08

  151284--151340                     24       2.4      24          100       0         114     33   24   8    33   1.86
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!