NC_050062.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_050062.1 Achyranthes bidentata chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151284

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  7918--7948                         14       2.2      14          100       0         62      9    6    0    83   0.79

  8205--8238                         15       2.3      15          90        10        52      58   5    0    35   1.22

  26283--26312                       12       2.5      12          94        0         51      3    16   20   60   1.50

  30145--30203                       29       2.0      29          100       0         118     44   20   10   25   1.83

  48269--48293                       12       2.1      12          100       0         50      72   20   0    8    1.10

  62895--62939                       11       4.0      11          80        5         54      60   6    6    26   1.47

  62899--62950                       23       2.2      24          96        3         97      63   3    5    26   1.34

  75872--75909                       19       2.0      19          100       0         76      26   5    10   57   1.53

  87921--87977                       24       2.4      24          96        0         105     15   22   12   49   1.78

  90311--90371                       18       3.4      18          100       0         122     27   9    26   36   1.88

  105789--105854                     32       2.1      32          91        0         105     40   22   10   25   1.86

  121429--121473                     16       2.9      16          83        3         56      20   22   6    51   1.70

  129163--129228                     32       2.1      32          91        0         105     25   10   22   40   1.86

  144646--144706                     18       3.4      18          100       0         122     36   26   9    27   1.88

  147040--147096                     24       2.4      24          96        0         105     49   12   22   15   1.78
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!