NC_050250.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_050250.1 Zanthoxylum armatum chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  158579

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  9483--9515                         15       2.2      15          94        0         57      36   0    3    60   1.12

  15434--15462                       15       1.9      15          100       0         58      68   0    10   20   1.18

  37822--37854                       16       2.1      16          100       0         66      48   0    21   30   1.50

  48502--48548                       23       2.0      23          100       0         94      38   8    17   36   1.80

  61304--61352                       25       2.0      24          84        4         62      40   12   4    42   1.61

  61736--61762                       14       1.9      14          100       0         54      22   25   0    51   1.48

  70181--70219                       21       1.9      21          89        5         62      33   25   10   30   1.89

  86915--86960                       23       2.0      23          95        0         83      47   15   8    28   1.74

  91093--91167                       21       3.2      24          72        12        75      10   22   9    57   1.61

  93535--93588                       18       3.0      18          97        0         99      29   9    27   33   1.88

  101345--101378                     17       2.0      17          88        11        52      5    8    2    82   0.93

  101878--101915                     18       2.1      18          90        0         58      23   7    7    60   1.51

  115688--115728                     18       2.3      18          86        0         55      14   12   9    63   1.52

  122251--122287                     18       2.1      18          100       0         74      45   5    10   37   1.62

  142445--142482                     18       2.1      18          90        0         58      60   7    7    23   1.51

  142982--143015                     17       2.0      17          88        0         50      82   2    8    5    0.93

  150772--150825                     18       3.0      18          97        0         99      33   27   9    29   1.88

  153193--153267                     21       3.2      24          72        12        75      57   9    22   10   1.61

  157400--157445                     23       2.0      23          95        0         83      28   8    15   47   1.74
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!