NC_057507.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_057507.1 Clematis montana chloroplast, complete genome
Parameters: 2 7 7 80 10 50 500
Length: 159523
Tables: 1
This is table 1 of 1 ( 18 repeats found )
Click on indices to view alignment
Table Explanation
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Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
1084--1110 11 2.5 11 100 0 54 37 0 7 55 1.28
16097--16126 14 2.1 15 93 6 53 23 0 0 76 0.78
31233--31257 12 2.1 12 100 0 50 60 8 8 24 1.52
50116--50153 17 2.2 18 85 4 51 42 15 18 23 1.89
51296--51342 23 2.0 23 100 0 94 25 8 4 61 1.43
54941--54966 12 2.2 12 100 0 52 23 15 0 61 1.33
64980--65016 17 2.2 17 95 0 65 67 5 0 27 1.12
64980--65023 15 2.8 16 83 16 56 65 6 0 27 1.17
88557--88625 21 3.2 22 78 12 72 11 23 10 55 1.66
91002--91080 18 4.6 18 93 4 128 32 6 25 35 1.81
91014--91072 9 6.6 9 78 0 64 33 6 27 32 1.83
92877--92905 12 2.4 12 100 0 58 27 20 10 41 1.85
118762--118800 16 2.4 16 83 12 53 43 0 0 56 0.99
123823--123847 12 2.1 12 100 0 50 44 0 0 56 0.99
146004--146032 12 2.4 12 100 0 58 41 10 20 27 1.85
147836--147895 9 6.7 9 76 0 66 33 26 6 33 1.83
147829--147907 18 4.6 18 93 4 128 35 25 6 32 1.81
150285--150352 21 3.2 21 81 10 77 54 10 23 11 1.67
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Tables: 1
The End!