NC_059814.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_059814.1 Scutellaria barbata chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152050

    Tables:   1   

    This is table  1  of  1  ( 22 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  6681--6709                         15       1.9      15          100       0         58      48   0    24   27   1.51

  6818--6850                         16       2.1      16          88        11        50      45   6    6    42   1.53

  15634--15673                       19       2.1      19          90        9         64      42   10   5    42   1.60

  29599--29638                       20       2.0      20          100       0         80      35   10   20   35   1.86

  30097--30135                       13       3.0      13          100       0         78      38   7    15   38   1.76

  59316--59360                       16       2.8      16          100       0         90      24   20   20   35   1.96

  60247--60291                       21       2.1      21          91        0         72      28   22   15   33   1.95

  64160--64197                       19       2.0      19          89        0         58      26   26   13   34   1.93

  68239--68279                       21       2.0      21          100       0         82      29   24   9    36   1.87

  88832--88886                       24       2.5      22          85        8         67      14   23   12   49   1.78

  88854--88921                       21       3.2      21          77        8         75      11   22   10   55   1.65

  91256--91297                       18       2.3      18          95        0         75      30   9    26   33   1.88

  106950--107009                     31       1.9      31          93        0         102     38   23   10   28   1.87

  110911--110949                     20       2.0      20          85        10        53      56   23   0    20   1.42

  112746--112772                     13       2.1      13          100       0         54      44   7    7    40   1.60

  125230--125278                     14       2.9      17          77        22        59      2    16   6    75   1.09

  125237--125271                     14       2.5      14          90        0         61      0    17   5    77   0.96

  129095--129154                     31       1.9      31          93        0         102     28   10   23   38   1.87

  144807--144848                     18       2.3      18          95        0         75      33   26   9    30   1.88

  144807--144860                     18       3.2      17          87        7         58      35   24   9    31   1.87

  147201--147254                     21       2.6      21          82        11        74      59   11   20   9    1.59

  147183--147272                     21       4.1      22          75        8         67      53   11   23   12   1.70
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!