NC_060715.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_060715.1 Myristica fragrans chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  155868

    Tables:   1   

    This is table  1  of  1  ( 18 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  27898--27943                       23       2.0      23          95        0         83      39   2    15   43   1.59

  28098--28125                       14       2.0      14          100       0         56      57   7    7    28   1.52

  29019--29052                       17       2.0      17          94        0         59      38   17   11   32   1.86

  71280--71310                       15       2.1      15          100       0         62      51   19   6    22   1.69

  82304--82349                       24       1.9      24          86        0         65      26   32   13   28   1.93

  89608--89638                       15       2.1      15          100       0         62      19   32   0    48   1.49

  91874--91941                       21       3.1      21          83        8         84      13   23   11   51   1.73

  94302--94354                       24       2.2      24          100       0         106     30   11   24   33   1.90

  102080--102104                     12       2.1      12          100       0         50      24   8    0    68   1.16

  125937--125987                     18       2.8      18          81        3         57      17   11   7    62   1.51

  128585--128624                     20       2.0      20          85        5         53      17   25   7    50   1.72

  129843--129878                     18       2.0      18          94        0         63      30   13   11   44   1.79

  130532--130564                     16       2.1      16          100       0         66      12   24   0    63   1.28

  130961--131012                     26       2.0      26          100       0         104     15   23   7    53   1.67

  140827--140851                     12       2.1      12          100       0         50      68   0    8    24   1.16

  148577--148629                     24       2.2      24          100       0         106     33   24   11   30   1.90

  150990--151057                     21       3.1      21          83        8         84      51   11   23   13   1.73

  153293--153323                     15       2.1      15          100       0         62      48   0    32   19   1.49
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!