NC_063329.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_063329.1 Buddleja officinalis chloroplast, complete genome
Parameters: 2 7 7 80 10 50 500
Length: 154363
Tables: 1
This is table 1 of 1 ( 22 repeats found )
Click on indices to view alignment
Table Explanation
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Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
15816--15855 19 2.1 19 95 0 71 47 12 5 35 1.63
32695--32736 21 2.0 21 100 0 84 47 14 14 23 1.80
37022--37047 12 2.2 12 100 0 52 53 0 15 30 1.42
48904--48982 26 3.0 26 100 0 158 43 22 7 26 1.80
60641--60683 17 2.6 17 85 3 52 48 11 2 37 1.52
61190--61234 21 2.1 21 100 0 90 31 22 15 31 1.95
68643--68679 17 2.1 18 90 5 58 2 24 0 72 0.97
70562--70595 17 2.0 17 100 0 68 64 0 5 29 1.17
75598--75634 19 1.9 19 88 0 56 59 13 2 24 1.47
80677--80723 24 2.0 24 86 0 67 29 31 12 25 1.93
81942--81967 12 2.2 12 100 0 52 23 15 7 53 1.67
90156--90210 24 2.5 22 85 8 67 14 23 12 49 1.78
90178--90245 21 3.2 21 77 8 75 11 22 8 57 1.61
92586--92663 18 4.3 18 90 0 129 29 10 26 33 1.89
100486--100534 17 3.0 17 86 13 68 30 0 22 46 1.52
108448--108508 31 2.0 31 93 0 104 40 21 9 27 1.85
112504--112542 20 2.0 20 85 10 53 56 23 0 20 1.42
114476--114515 20 2.0 20 100 0 80 40 5 20 35 1.74
131210--131270 31 2.0 31 93 0 104 27 9 21 40 1.85
139184--139232 17 3.0 17 83 16 68 46 22 0 30 1.52
147055--147132 18 4.3 18 90 0 129 33 26 10 29 1.89
149473--149562 21 4.1 22 75 8 76 54 10 23 12 1.67
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Tables: 1
The End!