NC_065109.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_065109.1 Cinnamomum tamala voucher XTBGLQM0255 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152790

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  3884--3908                         12       2.1      12          100       0         50      60   8    16   16   1.58

  33535--33573                       15       2.5      15          87        4         51      41   12   7    38   1.72

  34929--34961                       17       1.9      17          93        0         57      57   0    30   12   1.35

  48523--48554                       13       2.4      13          94        5         55      59   12   18   9    1.59

  71605--71649                       21       2.1      21          87        0         63      33   26   11   28   1.91

  91843--91980                       36       3.8      36          96        0         240     16   10   8    64   1.48

  92217--92267                       21       2.4      20          90        9         75      45   21   15   17   1.86

  92557--92645                       21       4.1      21          85        5         108     13   26   10   49   1.74

  94215--94258                       21       2.1      21          83        8         54      31   15   25   27   1.96

  95008--95064                       24       2.4      24          100       0         114     33   8    24   33   1.86

  112168--112207                     19       2.1      19          100       0         80      32   35   0    32   1.58

  125623--125656                     9        3.4      10          88        12        52      55   29   0    14   1.40

  129359--129399                     18       2.2      19          91        4         66      17   7    9    65   1.44

  132447--132482                     18       2.0      18          100       0         72      22   27   11   38   1.88

  132581--132706                     18       7.0      18          96        0         225     11   15   11   61   1.55

  134245--134284                     19       2.1      19          100       0         80      32   0    35   32   1.58

  151388--151444                     24       2.4      24          100       0         114     33   24   8    33   1.86
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!