NC_065276.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_065276.1 Clematis hexapetala voucher BJFC:L. Xie 20150711 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  159534

    Tables:   1   

    This is table  1  of  1  ( 18 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  1082--1108                         11       2.5      11          100       0         54      37   0    7    55   1.28

  31087--31111                       12       2.1      12          100       0         50      60   8    8    24   1.52

  36595--36653                       31       1.9      30          96        3         109     30   8    3    57   1.45

  49977--50006                       15       1.9      16          93        6         53      6    6    3    83   0.90

  50029--50066                       17       2.2      18          85        4         51      42   15   18   23   1.89

  54856--54881                       12       2.2      12          100       0         52      23   15   0    61   1.33

  60951--60990                       15       2.7      15          92        0         62      57   0    0    42   0.98

  64912--64948                       17       2.2      17          100       0         74      64   5    0    29   1.15

  65056--65090                       13       2.7      13          95        0         61      45   5    2    45   1.41

  88498--88566                       21       3.2      22          78        12        72      11   23   10   55   1.66

  90943--91021                       18       4.6      18          93        4         128     32   6    25   35   1.81

  90955--91013                       9        6.6      9           78        0         64      33   6    27   32   1.83

  92818--92846                       12       2.4      12          100       0         58      27   20   10   41   1.85

  116011--116040                     10       3.1      10          95        4         53      10   16   0    73   1.09

  146014--146042                     12       2.4      12          100       0         58      41   10   20   27   1.85

  147846--147905                     9        6.7      9           76        0         66      33   26   6    33   1.83

  147839--147917                     18       4.6      18          93        4         128     35   25   6    32   1.81

  150295--150362                     21       3.2      21          81        10        77      54   10   23   11   1.67
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!