NC_066718.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_066718.1 Clematis chinensis chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  159497

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  31089--31113                       12       2.1      12          100       0         50      60   8    8    24   1.52

  36581--36621                       21       2.0      21          85        0         55      26   9    4    58   1.50

  36571--36620                       25       2.0      24          96        3         91      30   8    4    58   1.45

  50030--50067                       17       2.2      18          85        4         51      42   15   18   23   1.89

  54862--54887                       12       2.2      12          100       0         52      23   15   0    61   1.33

  64908--64944                       17       2.2      17          100       0         74      64   5    0    29   1.15

  65051--65085                       13       2.7      13          95        0         61      45   5    2    45   1.41

  88505--88573                       21       3.2      22          78        12        72      11   23   10   55   1.66

  90950--91028                       18       4.6      18          93        4         128     32   6    25   35   1.81

  90962--91020                       9        6.6      9           78        0         64      33   6    27   32   1.83

  92825--92853                       12       2.4      12          100       0         58      27   20   10   41   1.85

  112888--112925                     18       2.1      18          95        0         67      63   13   5    18   1.48

  123768--123830                     22       2.9      22          78        4         74      47   0    0    52   1.00

  145978--146006                     12       2.4      12          100       0         58      41   10   20   27   1.85

  147810--147869                     9        6.7      9           76        0         66      33   26   6    33   1.83

  147803--147881                     18       4.6      18          93        4         128     35   25   6    32   1.81

  150259--150326                     21       3.2      21          81        10        77      54   10   23   11   1.67
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!