NC_069848.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_069848.1 Clematis armandii chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  159353

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  1092--1118                         11       2.5      11          100       0         54      37   0    7    55   1.28

  15983--16016                       17       2.0      17          94        0         59      26   0    0    73   0.83

  31103--31127                       12       2.1      12          100       0         50      60   8    8    24   1.52

  50006--50043                       17       2.2      18          85        4         51      42   15   18   23   1.89

  51227--51255                       10       3.0      10          95        5         51      41   6    10   41   1.66

  54847--54872                       12       2.2      12          100       0         52      23   15   0    61   1.33

  67395--67445                       13       3.8      14          75        17        54      66   0    0    33   0.92

  67395--67431                       14       2.7      14          84        16        51      64   0    0    35   0.94

  88432--88500                       21       3.2      22          78        12        72      11   23   10   55   1.66

  90877--90955                       18       4.6      18          93        4         128     32   6    25   35   1.81

  90889--90947                       9        6.6      9           78        0         64      33   6    27   32   1.83

  92752--92780                       12       2.4      12          100       0         58      27   20   10   41   1.85

  99657--99682                       8        3.2      8           100       0         52      34   0    42   23   1.54

  112830--112879                     18       2.8      18          93        0         82      56   12   8    24   1.62

  138933--138958                     8        3.2      8           100       0         52      23   42   0    34   1.54

  145835--145863                     12       2.4      12          100       0         58      41   10   20   27   1.85

  147667--147726                     9        6.7      9           76        0         66      33   26   6    33   1.83

  147660--147738                     18       4.6      18          93        4         128     35   25   6    32   1.81

  150116--150183                     21       3.2      21          81        10        77      54   10   23   11   1.67
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!